PRACE Whitepapers

Wednesday 11 January 2012

This page contains a list of public whitepapers produced by the PRACE project.

The whitepapers document the work done over an 18 month period, in task 7.6 of work package 7 of the PRACE-1IP project. The purpose of the work has been to support European HPC users and researchers to scale their code by helping them overcome their data challenges. The support has come from PRACE experts from leading European HPC centers. In total 12 HPC application have been supported, which has resulted in whitepapers detailing the work which has been done. The whitepaper subjects range from detailed descriptions of implemented parallel algorithms to user guides for Tier-0 I/O subsystems and tools useful for handling of Petascale data. All the produced whitepapers are freely available here and are useful for users facing similar data challenges.

For more information contact Mohammad Jowkar (mohammad.jowkar (at) bsc.es)

Disclaimer

This deliverable has been prepared by Work Package 7 of the Project in accordance with the Consortium Agreement and the Grant Agreement n° RI-261557. It solely reflects the opinion of the parties to such agreements on a collective basis in the context of the Project and to the extent foreseen in such agreements. Please note that even though all participants to the Project are members of PRACE AISBL, this deliverable has not been approved by the Council of PRACE AISBL and therefore does not emanate from it nor should it be considered to reflect PRACE AISBL’s individual opinion.

Copyright notices

© 2011 PRACE Consortium Partners. All rights reserved. This document is a project document of the PRACE project. All contents are reserved by default and may not be disclosed to third parties without the written consent of the PRACE partners, except as mandated by the European Commission contract RI-261557 for reviewing and dissemination purposes.

All trademarks and other rights on third party products mentioned in this document are acknowledged as own by the respective holders.


Attached documents

A Parallel Fast BEM for the Helmholtz Equation as an Extension of SPECFEM3D

Document : PDF
162.4 kb

In this paper, a new parallel acoustic simulation package has been created, using the boundary element method (BEM). The package is built on top of SPECFEM3D, which is parallel software for doing seismic simulations, e.g. earthquake simulations of the globe.


Best Practices on Standards, Policies and Quality Assurance in Digital Repositories for Long Term Preservation

Document : PDF
131.9 kb

Code_Saturne Optimizations in Preprocessing

Document : PDF
83.9 kb

Data I/O Optimization in GROMACS Using the Global Arrays Toolkit

Document : PDF
228 kb

Evaluating Application I/O Optimization by I/O Forwarding Layers

Document : PDF
58.5 kb

Fixing Nodes Strategies for the Effective Regularization of the Subdomain Stiffness Matrices Arising in Total FETI

Document : PDF
149.4 kb

Implementation of Fragment Orbital Method (FMO) for Highly Parallelized Quantum Chemical Calculations with CP2K

Document : PDF
49.8 kb

Implementing a XDMF/HDF5 Parallel File System in Alya

Document : PDF
484.7 kb

Investigation of Load Balancing Scalability in Space Plasma Simulations

Document : PDF
286.7 kb

In-situ Visualization State-of-the-art and Some Use Cases

Document : PDF
540.3 kb

I/O-profiling with Darshan

Document : PDF
48.9 kb

Media and Technology Appraisal for Long Term Preservation

Document : PDF
74.4 kb

Parallel I/O performance and scalability study on the PRACE CURIE supercomputer

Document : PDF
269.4 kb

Parallel Mesh Generation Migration and Partitioning for the Elmer Application

Document : PDF
647 kb

Parallel Mesh Multiplication for Code_Saturne

Document : PDF
264 kb

Parallel Uniform Mesh Subdivision in Alya

Document : PDF
2.5 Mb

Parallel Visualization of Petascale Simulation Results from GROMACS NAMD and CP2K on IBM Blue Gene P using VisIt Visualization Toolkit

Document : PDF
116 kb

Storage and Long Term Preservation Strategies in PRACE Tier-1 Datacentres

Document : PDF
1.5 Mb

The Jonker Case After Care: Handling the ENTRAIN Dataset after its Production on Jugene

Document : PDF
35.1 kb

The JUGENE IO Subsystem, its Architecture, Guidelines and Tools for Using it Efficiently

Document : PDF
1.4 Mb

The Vagn-Ekman Case Study at SNIC-NSC

Document : PDF
40.1 kb

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